Protein ZmARID6
ZmARID6 is a protein in the ARID family.
Information
TF Name: ZmARID6
Species: Maize
TF Family: ARID
Gene Name(Synonym): ARID6
Uniprot ID: A0A1D6PDQ1

Protein ZmARID6

ZmARID6 is a protein in the ARID family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00505PF01388PF09011
Zm00001eb240740_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d016456DAPseq no logo sequence fimo position
Zm00001d016456DAPseq no logo sequence fimo position
Zm00001d016456ChIPseq no logo sequence fimo position
Zm00001d016456PChIPseq no logo sequence fimo position

Interactions where ZmARID6 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmARID6 is the target  
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There are 128 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb240740_T001 from maize genome v5

Amino Acid Sequence
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MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF01388
PF00505
PF09011
PF00505
Hover here to show all domains

Nucleotide Sequence
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ACAGATTCATAAAAAAACATATATC...

GRMZM2G024976_T01 from maize genome v3


Related TFome: pUT5683

Amino Acid Sequence
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MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Nucleotide Sequence
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ACAGATTCATAAAAAAACATATATC...

Zm00001d016456_T001 from maize genome v4

Amino Acid Sequence
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MLKKYYMSLLYHFEQLYFFRVQGWHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGY
IVTVIMGSKSTKAILYNCTEEPALPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQ
YPAQDRLISKMIGERWNNLSPEDKAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQ
DDMLLSNQGYSSSDESDHSGEKNVEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Nucleotide Sequence
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GAGAGCGAGAGGAGGTGGGCGGCCA...

Zm00001d016456_T002 from maize genome v4

Amino Acid Sequence
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MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLNCYYPCCFYHHFLNSMRENCNLVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQGWHQQE
IDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPALPTPE
PPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPEDKAVYQ
QRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKNVEDEL
NTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Nucleotide Sequence
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ACATATATCTTTGATGAGGGGTGAC...

Zm00001d016456_T003 from maize genome v4

Amino Acid Sequence
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MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Nucleotide Sequence
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ACAGATTCATAAAAAAACATATATC...

Zm00001d016456_T005 from maize genome v4

Amino Acid Sequence
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MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Nucleotide Sequence
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ACATATATCTTTGATGAGGGGTGAC...

Zm00001d016456_T006 from maize genome v4

Amino Acid Sequence
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MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLNCYYPCCFYHHFLNSMRENCNLVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQGWHQQE
IDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPALPTPE
PPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPEDKAVYQ
QRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKNVEDEL
NTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Nucleotide Sequence
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ACAGATTCATAAAAAAACATATATC...

Zm00001d016456_T007 from maize genome v4

Amino Acid Sequence
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MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Nucleotide Sequence
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ACAGATTCATAAAAAAACATATATC...

Zm00001d016456_T008 from maize genome v4

Amino Acid Sequence
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MSELVRAAAPAAAEEEKKAVAAVTVVAKGKEKAEVTPTVEASSVGDRGRFVAYPSRVAEHTDVVADAARFRAALEGLHTH
MGTRLKVPIIGGKDLDLHQLYKEVTSRGGIDKVKAENRWREVTASFIFPATATNASFMLKKYYMSLLYHFEQLYFFRVQG
WHQQEIDSRMNSSIEIKTEGQAYHKRKRGINTSSDPASSSDNVDVDVIVDGKFEHGYIVTVIMGSKSTKAILYNCTEEPA
LPTPEPPVANNSTGLKGVRRRRRRRKKLSTTDPRHPKPNRSGYNFFFQDQHRILKPQYPAQDRLISKMIGERWNNLSPED
KAVYQQRGVEDKERYRTQLAAYKELRTGQPISNAVPIQQRLPLTEVTIDEVDSKVSQDDMLLSNQGYSSSDESDHSGEKN
VEDELNTETSPEVSMETTGSPGHPDPSRDGDHFELRRRENPKADEKDNAPPDS

Nucleotide Sequence
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AGGAGAAGACGAGGTTAAGGGGAGA...


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